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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10514155 chr18:72793718 A/G SOCS6 chr18:67956137-67997436:+ 0.69 6 4.66E-9 Box Plot
BLCA rs10514155 chr18:72793718 A/G TMX3 chr18:66340925-66382535:- 0.95 8.37 1.12E-15 Box Plot
BLCA rs10514155 chr18:72793718 A/G TXNL1 chr18:54264439-54318831:- 0.83 6.8 4.08E-11 Box Plot
BLCA rs10514155 chr18:72793718 A/G TXNL4A chr18:77730811-77793949:- 0.82 8.06 9.85E-15 Box Plot
BLCA rs10514155 chr18:72793718 A/G VPS4B chr18:61056423-61089716:- 0.7 7.35 1.23E-12 Box Plot
BLCA rs10514155 chr18:72793718 A/G ZNF236 chr18:74534563-74682683:+ 0.54 6.37 5.51E-10 Box Plot
BLCA rs10514155 chr18:72793718 A/G ZNF24 chr18:32912176-32925446:- 0.72 6.89 2.26E-11 Box Plot
BLCA rs10514155 chr18:72793718 A/G ZNF271 chr18:32870246-32890730:+ 0.77 5.98 5.14E-9 Box Plot
BLCA rs10514847 chr13:44626749 A/G MED4 chr13:48627459-48669267:- -0.88 -6.11 2.52E-9 Box Plot
BLCA rs10515972 chr18:53107884 A/G HAUS1 chr18:43684298-43708299:+ 0.67 5.99 4.82E-9 Box Plot
BLCA rs10515972 chr18:53107884 A/G HDHD2 chr18:44633774-44676891:- 0.77 6.31 7.66E-10 Box Plot
BLCA rs10515972 chr18:53107884 A/G IER3IP1 chr18:44679205-44702745:- 0.84 6.05 3.5E-9 Box Plot
BLCA rs10515972 chr18:53107884 A/G KIAA1468 chr18:59854491-59975062:+ 0.78 8.14 5.72E-15 Box Plot
BLCA rs10515972 chr18:53107884 A/G MBD1 chr18:47793252-47808144:- 0.8 6.13 2.16E-9 Box Plot
BLCA rs10515972 chr18:53107884 A/G MBD2 chr18:51677971-51751158:- 0.83 7.11 5.81E-12 Box Plot